Ganqiang Liu

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I am a PhD student in the Mattick lab. The high-throughput sequencing technologies have revolutionized our research to genome and epigenome as well as transcriptome fields. My research interests are not only in epigenomic and non-coding RNA control gene expression programs, but also developing novel computational methods to uncover diversity biological and biomedical questions. I have strong experiences to analyze diversity NGS datasets and I am really keen to reveal RNA interaction and their regulatory roles. Ultimately, it is expected to provide novel insights and therapeutic targets for complexity diseases from RNA research.

Publications

Peer-reviewed journal articles:

Liu G, Mercer TR, Shearwood AM, Siira SJ, Hibbs ME, Mattick JS, Rackham O, Filipovska A. Mapping of Mitochondrial RNA-Protein Interactions by Digital RNase Footprinting. Cell Reports, 2013 Nov 14;5(3):839-848

Liu G, Mattick JS, Taft RJ. A meta-analysis of the genomic and transcriptomic composition of complex life. Cell Cycle, 2013, Jun 6;12(13):2061-2072

Wang Y, Chen J, Li Q, Wang H, Liu G, Jing Q, Shen B. Identifying novel prostate cancer associated pathways based on integrative microarray data analysis. Computational Biology and Chemistry, 2011, June; 35(3): 151-158

Zou J, Li WQ, Li Q, Li XQ, Zhang JT, Liu GQ, Chen J, Qiu XX, Tian FJ, Wang ZZ, Zhu N, Qin YW, Shen B, Liu TX, Jing Q. Two Functional MicroRNA-126s Repress a Novel Target Gene p21-Activated Kinase 1 to Regulate Vascular Integrity in Zebrafish. Circulation Research, 2011 Jan 21;108(2):201-209

Liu G, Ding M, Chen J, Huang J, Wang H, Jing Q, Shen B. Computational analysis of microRNA function in heart development. Acta Biochimica et Biophysica Sinica, 2010 Sep;42(9):662-70. (Cover Story)

Liu G, Ding M, Wang H, Huang J, Jing Q, Shen B. Pathway analysis of microRNAs in mouse heart development. Int. J. Bioinformatics Research and Applications, 2010;6(1):12-20.

Conference abstracts:

Lotta Avession, Ganqiang Liu, Martin A. Smith, Lauren Crumlish, Guy Barry, John S. Mattick. A role for ADAR3 in neurogenesis and synaptic plasticity. The Non-coding Genome, EMBL Heidelberg, Germany Oct 9-12. 2013

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